Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EDI29_03810 | Not Available | Negative | 836132 - 836866 | 26199.3 |
| hypothetical protein | EDI29_03815 | Not Available | Positive | 837040 - 837243 | 7484.05 |
| abc transporter permease | EDI29_03820 | Not Available | Negative | 837256 - 838074 | 29424.0 |
| abc transporter permease | EDI29_03825 | Not Available | Negative | 838112 - 839380 | 46860.8 |
| abc transporter substrate-binding protein | EDI29_03830 | Not Available | Negative | 839423 - 840502 | 39474.9 |
| nad-dependent succinate-semialdehyde dehydrogenase | EDI29_03835 | Not Available | Negative | 840893 - 842365 | 52963.7 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EDI29_03840 | Not Available | Negative | 842376 - 843641 | 45113.4 |
| plp-dependent aminotransferase family protein | EDI29_03845 | Not Available | Positive | 843780 - 845273 | 55253.9 |
| abc transporter atp-binding protein | EDI29_03850 | Not Available | Positive | 845465 - 846559 | 41280.9 |
| glsb/yeaq/ymge family stress response membrane protein | EDI29_03855 | Not Available | Negative | 846642 - 846890 | 8709.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
