Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDI29_03760 | Not Available | Negative | 824336 - 824734 | 14631.6 |
| metal abc transporter substrate-binding protein | EDI29_03765 | Not Available | Negative | 824813 - 825637 | 30110.4 |
| o-succinylbenzoate synthase | EDI29_03770 | Not Available | Negative | 826051 - 827163 | 41339.9 |
| abc transporter permease | EDI29_03775 | Not Available | Negative | 827205 - 827864 | 23600.7 |
| methionine abc transporter atp-binding protein | EDI29_03780 | Not Available | Negative | 827857 - 828879 | 37274.1 |
| had family hydrolase | EDI29_03785 | Not Available | Negative | 829546 - 830208 | 24457.6 |
| phosphatase pap2 family protein | EDI29_03790 | Not Available | Positive | 830419 - 831726 | 47458.4 |
| hamp domain-containing protein | EDI29_03795 | Not Available | Positive | 832167 - 833693 | 54562.5 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | EDI29_03800 | Not Available | Negative | 833732 - 835033 | 46733.1 |
| phosphotransferase | EDI29_03805 | Not Available | Negative | 835030 - 836151 | 41761.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
