Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDI29_03660 | Not Available | Negative | 804025 - 804231 | 6859.1 |
| eal domain-containing protein | EDI29_03665 | Not Available | Positive | 804610 - 806190 | 59236.7 |
| sigma-54-dependent fis family transcriptional regulator | EDI29_03670 | Not Available | Negative | 806245 - 807273 | 38369.6 |
| dna-binding response regulator | EDI29_03675 | Not Available | Negative | 807642 - 808283 | 23504.0 |
| pas domain s-box protein | EDI29_03680 | Not Available | Negative | 808317 - 809789 | 55556.6 |
| rna polymerase sigma factor | EDI29_03685 | Not Available | Negative | 810030 - 810575 | 20817.1 |
| yopn family type iii secretion system gatekeeper subunit | EDI29_03690 | Not Available | Positive | 810903 - 812093 | 43482.8 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | EDI29_03695 | Not Available | Positive | 812090 - 814192 | 77465.5 |
| escd/yscd/hrpq family type iii secretion system inner membrane ring protein | EDI29_03700 | Not Available | Positive | 814202 - 815131 | 33948.5 |
| escn/yscn/hrcn family type iii secretion system atpase | EDI29_03705 | Not Available | Positive | 815131 - 816498 | 49227.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
