Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein hrpn | EDI29_03610 | Not Available | Negative | 796916 - 798013 | 36295.3 |
| type iii secretion protein | EDI29_03615 | Not Available | Negative | 798159 - 798506 | 12992.8 |
| type iii secretion protein hrpt | EDI29_03620 | Not Available | Negative | 798499 - 798690 | 7092.47 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | EDI29_03625 | Not Available | Negative | 798718 - 800787 | 75497.8 |
| type iii secretion protein | EDI29_03630 | Not Available | Negative | 800780 - 801214 | 15758.0 |
| serine kinase | EDI29_03635 | Not Available | Negative | 801201 - 801425 | 8067.4 |
| hrpe/yscl family type iii secretion apparatus protein | EDI29_03640 | Not Available | Negative | 801552 - 802151 | 22295.6 |
| type iii secretion protein | EDI29_03645 | Not Available | Negative | 802189 - 802821 | 23691.8 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | EDI29_03650 | Not Available | Negative | 802818 - 803585 | 27998.3 |
| type iii secretion protein | EDI29_03655 | Not Available | Negative | 803592 - 803957 | 12883.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
