Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter permease subunit urtb | EDI29_03510 | Not Available | Negative | 768911 - 770500 | 56436.1 |
| urea abc transporter substrate-binding protein | EDI29_03515 | Not Available | Negative | 770554 - 771822 | 46084.9 |
| gntr family transcriptional regulator | EDI29_03520 | Not Available | Negative | 771819 - 772607 | 30714.6 |
| urea carboxylase | EDI29_03525 | Not Available | Negative | 772681 - 776295 | 130678.0 |
| allophanate hydrolase | EDI29_03530 | Not Available | Negative | 776288 - 778090 | 63577.6 |
| gfo/idh/moca family oxidoreductase | EDI29_03535 | Not Available | Negative | 778272 - 779279 | 37430.2 |
| porin | EDI29_03540 | Not Available | Positive | 780639 - 781457 | 31244.1 |
| porin | EDI29_03545 | Not Available | Positive | 781589 - 782341 | 28491.0 |
| pectate lyase | EDI29_03550 | Not Available | Positive | 782441 - 784147 | 63578.3 |
| extracellular solute-binding protein | EDI29_03555 | Not Available | Negative | 784297 - 785418 | 42055.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
