Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycik family oxidoreductase | EDI29_03200 | Not Available | Negative | 704976 - 705737 | 27624.4 |
| protease sohb | EDI29_03205 | Not Available | Positive | 706091 - 707137 | 38771.1 |
| duf2498 family protein | EDI29_03210 | Not Available | Negative | 707193 - 707462 | 10263.2 |
| hypothetical protein | EDI29_03215 | Not Available | Positive | 707461 - 707649 | 7070.87 |
| type i dna topoisomerase | EDI29_03220 | Not Available | Positive | 707789 - 710389 | 97248.9 |
| hth-type transcriptional regulator cysb | EDI29_03225 | Not Available | Positive | 710905 - 711879 | 35928.1 |
| dipeptide/tripeptide permease dtpa | EDI29_03230 | Not Available | Negative | 711968 - 713485 | 54806.1 |
| endonuclease iii | EDI29_03235 | Not Available | Negative | 714152 - 714787 | 23342.3 |
| electron transport complex subunit e | EDI29_03240 | Not Available | Negative | 714784 - 715491 | 24720.0 |
| electron transport complex subunit rsxg | EDI29_03245 | Not Available | Negative | 715488 - 716117 | 22823.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
