Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | EDI29_03050 | Not Available | Positive | 672746 - 673342 | 22182.6 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | EDI29_03055 | Not Available | Negative | 673486 - 676161 | 96732.2 |
| hypothetical protein | EDI29_03060 | Not Available | Positive | 676428 - 676613 | 7030.76 |
| oligopeptide abc transporter substrate-binding protein oppa | EDI29_03065 | Not Available | Positive | 677196 - 678794 | 60213.0 |
| oligopeptide abc transporter substrate-binding protein oppa | EDI29_03070 | Not Available | Positive | 678986 - 680623 | 61413.4 |
| oligopeptide abc transporter permease oppb | EDI29_03075 | Not Available | Positive | 680678 - 681598 | 33448.1 |
| oligopeptide abc transporter permease oppc | EDI29_03080 | Not Available | Positive | 681610 - 682518 | 33245.1 |
| abc transporter atp-binding protein | EDI29_03085 | Not Available | Positive | 682530 - 683525 | 36680.0 |
| abc transporter atp-binding protein | EDI29_03090 | Not Available | Positive | 683522 - 684550 | 38062.5 |
| duf440 family protein | EDI29_03095 | Not Available | Negative | 684794 - 685117 | 12382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
