Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1315 family protein | EDI29_02950 | Not Available | Positive | 654768 - 655046 | 10429.6 |
| bifunctional nicotinamidase/pyrazinamidase | EDI29_02955 | Not Available | Negative | 655097 - 655744 | 23631.9 |
| l-asparaginase 1 | EDI29_02960 | Not Available | Negative | 655763 - 656782 | 37021.3 |
| signal peptide peptidase sppa | EDI29_02965 | Not Available | Negative | 656890 - 658740 | 67447.6 |
| nad(p)h nitroreductase | EDI29_02970 | Not Available | Positive | 659009 - 659560 | 20203.1 |
| dna topoisomerase iii | EDI29_02975 | Not Available | Positive | 659657 - 661582 | 72311.7 |
| duf1496 domain-containing protein | EDI29_02980 | Not Available | Positive | 661579 - 661872 | 10679.1 |
| exodeoxyribonuclease iii | EDI29_02985 | Not Available | Negative | 661980 - 662786 | 30785.3 |
| trimeric intracellular cation channel family protein | EDI29_02990 | Not Available | Positive | 663192 - 663818 | 22758.8 |
| hcp family type vi secretion system effector | EDI29_02995 | Not Available | Positive | 663990 - 664469 | 18060.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
