Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase | EDI29_02900 | Not Available | Positive | 643176 - 644429 | 46019.3 |
| bcr/cfla family efflux mfs transporter | EDI29_02905 | Not Available | Negative | 644452 - 645651 | 42353.5 |
| hemerythrin domain-containing protein | EDI29_02910 | Not Available | Negative | 645849 - 646259 | 15893.6 |
| yeah/yhbh family protein | EDI29_02915 | Not Available | Negative | 646391 - 647665 | 49313.0 |
| prka family serine protein kinase | EDI29_02920 | Not Available | Negative | 647702 - 649636 | 74222.9 |
| mipa/ompv family protein | EDI29_02925 | Not Available | Positive | 650092 - 650841 | 27476.1 |
| aldo/keto reductase | EDI29_02930 | Not Available | Positive | 650978 - 651829 | 31516.2 |
| d-hexose-6-phosphate mutarotase | EDI29_02935 | Not Available | Negative | 651905 - 652774 | 32499.3 |
| glyceraldehyde-3-phosphate dehydrogenase | EDI29_02940 | Not Available | Negative | 652880 - 653884 | 35927.9 |
| peptide-methionine (r)-s-oxide reductase | EDI29_02945 | Not Available | Positive | 654218 - 654637 | 15521.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
