Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter permease | EDI29_02700 | Not Available | Negative | 604053 - 604916 | 30651.6 |
| manganese/iron abc transporter atp-binding protein | EDI29_02705 | Not Available | Negative | 604916 - 605806 | 32182.5 |
| metal abc transporter substrate-binding protein | EDI29_02710 | Not Available | Negative | 605803 - 606717 | 33691.2 |
| duf2627 domain-containing protein | EDI29_02715 | Not Available | Positive | 607658 - 607774 | 4029.59 |
| cold-shock protein cspc | EDI29_02720 | Not Available | Positive | 607816 - 608025 | 7418.76 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | EDI29_02725 | Not Available | Positive | 608132 - 608962 | 30881.0 |
| manganese efflux pump mntp | EDI29_02730 | Not Available | Negative | 609225 - 609797 | 20303.6 |
| duf986 domain-containing protein | EDI29_02735 | Not Available | Negative | 610224 - 610682 | 17637.4 |
| pts mannose transporter subunit iid | EDI29_02740 | Not Available | Negative | 610966 - 611808 | 30822.4 |
| pts mannose/fructose/sorbose transporter subunit iic | EDI29_02745 | Not Available | Negative | 611823 - 612620 | 27426.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
