Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | EDI29_02650 | Not Available | Negative | 594301 - 595206 | 34313.5 |
| sugar abc transporter permease | EDI29_02655 | Not Available | Negative | 595199 - 596089 | 33432.1 |
| pectate lyase | EDI29_02660 | Not Available | Negative | 596135 - 597766 | 62318.2 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | EDI29_02665 | Not Available | Negative | 598039 - 598800 | 27234.8 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | EDI29_02670 | Not Available | Negative | 598882 - 599718 | 31230.2 |
| cupin domain-containing protein | EDI29_02675 | Not Available | Positive | 600084 - 600416 | 12441.9 |
| hexitol phosphatase hxpb | EDI29_02680 | Not Available | Negative | 600504 - 601169 | 24863.2 |
| hypothetical protein | EDI29_02685 | Not Available | Positive | 601455 - 602003 | 20710.0 |
| fructosamine kinase family protein | EDI29_02690 | Not Available | Negative | 602093 - 602953 | 33007.0 |
| metal abc transporter permease | EDI29_02695 | Not Available | Negative | 603199 - 604056 | 30847.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
