Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef and eal domain-containing protein | EDI29_02500 | Not Available | Positive | 560068 - 562236 | 80558.3 |
| sensor histidine kinase | EDI29_02505 | Not Available | Positive | 562386 - 564131 | 64646.3 |
| dna-binding response regulator | EDI29_02510 | Not Available | Positive | 564128 - 564877 | 29168.3 |
| mfs transporter | EDI29_02515 | Not Available | Positive | 565062 - 566285 | 43234.0 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | EDI29_02520 | Not Available | Positive | 566569 - 567906 | 49698.3 |
| glycerophosphodiester phosphodiesterase | EDI29_02525 | Not Available | Positive | 567937 - 568785 | 30975.3 |
| protease htpx | EDI29_02530 | Not Available | Positive | 568950 - 569831 | 31981.2 |
| oligogalacturonate lyase | EDI29_02535 | Not Available | Positive | 570172 - 571338 | 44401.0 |
| dna-binding transcriptional regulator kdgr | EDI29_02540 | Not Available | Positive | 571554 - 572345 | 29755.6 |
| hypothetical protein | EDI29_02545 | Not Available | Positive | 572601 - 572864 | 10022.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
