Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate lyase | EDI29_02450 | Not Available | Negative | 549961 - 551331 | 51573.6 |
| lysogenization regulator hfld | EDI29_02455 | Not Available | Negative | 551464 - 552102 | 22783.6 |
| trna 2-thiouridine(34) synthase mnma | EDI29_02460 | Not Available | Negative | 552105 - 553217 | 41381.0 |
| nudix hydrolase | EDI29_02465 | Not Available | Negative | 553352 - 553798 | 17151.4 |
| 23s rrna pseudouridine(2457) synthase rlue | EDI29_02470 | Not Available | Negative | 553791 - 554447 | 25033.4 |
| nadp-dependent isocitrate dehydrogenase | EDI29_02475 | Not Available | Positive | 554549 - 555802 | 45852.3 |
| 4fe-4s binding protein | EDI29_02480 | Not Available | Negative | 555926 - 557032 | 41517.9 |
| dna-binding protein | EDI29_02485 | Not Available | Negative | 557500 - 557844 | 13195.8 |
| helix-turn-helix transcriptional regulator | EDI29_02490 | Not Available | Negative | 558296 - 559030 | 26808.9 |
| hypothetical protein | EDI29_02495 | Not Available | Positive | 559424 - 559681 | 9551.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
