Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-n subunit gamma | EDI29_02245 | Not Available | Negative | 500208 - 500843 | 24603.3 |
| formate dehydrogenase subunit beta | EDI29_02250 | Not Available | Negative | 500836 - 501744 | 33359.5 |
| formate dehydrogenase-n subunit alpha | EDI29_02255 | Not Available | Negative | 501757 - 504804 | 112949.0 |
| methionine--trna ligase | EDI29_02260 | Not Available | Negative | 505085 - 507115 | 75723.4 |
| iron-sulfur cluster carrier protein apbc | EDI29_02265 | Not Available | Positive | 507339 - 508448 | 39426.8 |
| uridine kinase | EDI29_02270 | Not Available | Positive | 508636 - 509277 | 24586.8 |
| dctp deaminase | EDI29_02275 | Not Available | Positive | 509386 - 509967 | 21322.6 |
| outer membrane assembly protein asma | EDI29_02280 | Not Available | Positive | 510031 - 511866 | 67474.1 |
| anaerobic c4-dicarboxylate transporter dcuc | EDI29_02285 | Not Available | Positive | 512132 - 513484 | 47037.8 |
| duf86 domain-containing protein | EDI29_02290 | Not Available | Negative | 513528 - 513947 | 16069.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
