Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdf family zinc transporter zitb | EDI29_02095 | Not Available | Negative | 467238 - 468200 | 35488.2 |
| 3-deoxy-7-phosphoheptulonate synthase arog | EDI29_02100 | Not Available | Positive | 468495 - 469550 | 38542.1 |
| doxx family protein | EDI29_02105 | Not Available | Negative | 469762 - 470151 | 13510.9 |
| fmn-dependent nadh-azoreductase | EDI29_02110 | Not Available | Negative | 470183 - 470797 | 21792.0 |
| lysr family transcriptional regulator | EDI29_02115 | Not Available | Negative | 470971 - 471885 | 32508.4 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | EDI29_02120 | Not Available | Negative | 471998 - 472750 | 28406.6 |
| efflux rnd transporter permease subunit | EDI29_02125 | Not Available | Negative | 472888 - 476025 | 114888.0 |
| efflux rnd transporter periplasmic adaptor subunit | EDI29_02130 | Not Available | Negative | 476022 - 477515 | 53992.6 |
| tolc family protein | EDI29_02135 | Not Available | Negative | 477512 - 478771 | 46467.1 |
| cation transporter | EDI29_02140 | Not Available | Negative | 478784 - 479137 | 12878.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
