Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin-dependent carboxyltransferase family protein | EDI29_01945 | Not Available | Positive | 438844 - 439788 | 34523.5 |
| 5-oxoprolinase subunit pxpa | EDI29_01950 | Not Available | Positive | 439778 - 440515 | 26206.6 |
| pyroglutamyl-peptidase i | EDI29_01955 | Not Available | Positive | 440545 - 441192 | 23035.8 |
| endonuclease viii | EDI29_01960 | Not Available | Positive | 441241 - 442032 | 30369.6 |
| citrate synthase | EDI29_01965 | Not Available | Negative | 442106 - 443392 | 48183.9 |
| succinate dehydrogenase cytochrome b556 subunit | EDI29_01970 | Not Available | Positive | 444042 - 444431 | 14094.7 |
| succinate dehydrogenase membrane anchor subunit | EDI29_01975 | Not Available | Positive | 444425 - 444772 | 12802.2 |
| succinate dehydrogenase flavoprotein subunit | EDI29_01980 | Not Available | Positive | 444772 - 446538 | 64459.5 |
| succinate dehydrogenase iron-sulfur subunit | EDI29_01985 | Not Available | Positive | 446555 - 447271 | 26754.4 |
| 2-oxoglutarate dehydrogenase e1 component | EDI29_01990 | Not Available | Positive | 447546 - 450353 | 105586.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
