Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | EDI29_01745 | Not Available | Negative | 397183 - 397923 | 27120.8 |
| amino acid abc transporter substrate-binding protein | EDI29_01750 | Not Available | Negative | 398143 - 399039 | 32967.6 |
| apolipoprotein n-acyltransferase | EDI29_01755 | Not Available | Negative | 399475 - 401004 | 57032.9 |
| magnesium/cobalt transporter corc | EDI29_01760 | Not Available | Negative | 401012 - 401890 | 33411.6 |
| rrna maturation rnase ybey | EDI29_01765 | Not Available | Negative | 402018 - 402497 | 18078.2 |
| phoh family protein | EDI29_01770 | Not Available | Negative | 402494 - 403552 | 39533.5 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | EDI29_01775 | Not Available | Negative | 403895 - 405319 | 53578.2 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | EDI29_01780 | Not Available | Positive | 405547 - 406713 | 43029.8 |
| hypothetical protein | EDI29_01785 | Not Available | Negative | 406739 - 407353 | 22528.8 |
| Trna-gln | Not Available | Not Available | Positive | 407503 - 407577 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
