Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | EDI29_01695 | Not Available | Negative | 387186 - 389090 | 71461.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EDI29_01700 | Not Available | Negative | 389124 - 389594 | 17640.4 |
| ribosome silencing factor | EDI29_01705 | Not Available | Negative | 389596 - 389913 | 11428.6 |
| nicotinate-nucleotide adenylyltransferase | EDI29_01710 | Not Available | Negative | 390108 - 390797 | 25913.0 |
| dna polymerase iii subunit delta | EDI29_01715 | Not Available | Negative | 390764 - 391789 | 38976.5 |
| lps assembly lipoprotein lpte | EDI29_01720 | Not Available | Negative | 391786 - 392340 | 20499.7 |
| leucine--trna ligase | EDI29_01725 | Not Available | Negative | 392355 - 394937 | 97017.6 |
| zinc ribbon-containing protein | EDI29_01730 | Not Available | Positive | 395248 - 395730 | 18693.0 |
| amino acid abc transporter atp-binding protein | EDI29_01735 | Not Available | Negative | 395780 - 396505 | 26751.8 |
| glutamate/aspartate abc transporter permease gltk | EDI29_01740 | Not Available | Negative | 396505 - 397179 | 25032.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
