Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate coa-transferase subunit alpha | EDI29_01590 | Not Available | Negative | 369538 - 370194 | 23113.3 |
| hypothetical protein | EDI29_01595 | Not Available | Negative | 370358 - 370657 | 10760.0 |
| duf1446 domain-containing protein | EDI29_01600 | Not Available | Negative | 370657 - 371997 | 47665.0 |
| citrate transporter | EDI29_01605 | Not Available | Negative | 372059 - 373381 | 46658.1 |
| lysr family transcriptional regulator | EDI29_01610 | Not Available | Positive | 373865 - 374764 | 33690.6 |
| ypfn family protein | EDI29_01615 | Not Available | Negative | 374828 - 375019 | 7665.26 |
| d-alanyl-d-alanine carboxypeptidase family protein | EDI29_01620 | Not Available | Negative | 375022 - 375696 | 25727.2 |
| succinyl-diaminopimelate desuccinylase | EDI29_01625 | Not Available | Negative | 375693 - 376820 | 41062.9 |
| arsc family reductase | EDI29_01630 | Not Available | Negative | 376822 - 377199 | 14350.1 |
| nuclear transport factor 2 family protein | EDI29_01640 | Not Available | Positive | 378008 - 378397 | 14228.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
