Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EDI29_01540 | Not Available | Negative | 355242 - 355763 | 19820.7 |
| tonb-dependent siderophore receptor | EDI29_01545 | Not Available | Positive | 356244 - 358622 | 86134.4 |
| abc transporter atp-binding protein/permease | EDI29_01550 | Not Available | Positive | 358684 - 360474 | 67148.9 |
| hypothetical protein | EDI29_01555 | Not Available | Negative | 360580 - 360951 | 13922.7 |
| autotransporter domain-containing protein | EDI29_01560 | Not Available | Negative | 361115 - 364063 | 104149.0 |
| duf1272 domain-containing protein | EDI29_01565 | Not Available | Positive | 364348 - 364575 | 8348.07 |
| esterase | EDI29_01570 | Not Available | Positive | 364738 - 365355 | 22081.4 |
| hamp domain-containing protein | EDI29_01575 | Not Available | Positive | 365726 - 367396 | 59420.8 |
| acetyl-coa c-acetyltransferase | EDI29_01580 | Not Available | Negative | 367701 - 368879 | 40962.4 |
| coa transferase subunit b | EDI29_01585 | Not Available | Negative | 368891 - 369538 | 22733.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
