Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | EDI29_01490 | Not Available | Positive | 344185 - 344898 | 26860.4 |
| duf441 domain-containing protein | EDI29_01495 | Not Available | Positive | 345095 - 345547 | 15686.2 |
| trna(met) cytidine acetyltransferase | EDI29_01500 | Not Available | Positive | 345565 - 347664 | 78023.3 |
| thioredoxin | EDI29_01505 | Not Available | Negative | 347697 - 348962 | 47339.0 |
| metalloprotease tldd | EDI29_01510 | Not Available | Negative | 349009 - 350454 | 51509.9 |
| peptidase u62 | EDI29_01515 | Not Available | Negative | 350489 - 351853 | 48305.8 |
| biopolymer transporter exbd | EDI29_01520 | Not Available | Negative | 352015 - 352437 | 15322.6 |
| mota/tolq/exbb proton channel family protein | EDI29_01525 | Not Available | Negative | 352452 - 353192 | 26770.4 |
| energy transducer tonb | EDI29_01530 | Not Available | Negative | 353271 - 354146 | 31037.3 |
| fecr family protein | EDI29_01535 | Not Available | Negative | 354264 - 355217 | 35050.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
