Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | EDI29_01440 | Not Available | Negative | 334156 - 335193 | 36850.1 |
| uracil phosphoribosyltransferase | EDI29_01445 | Not Available | Positive | 335547 - 336173 | 22524.8 |
| uracil permease | EDI29_01450 | Not Available | Positive | 336529 - 337818 | 45003.8 |
| dnaa inactivator hda | EDI29_01455 | Not Available | Positive | 337918 - 338625 | 26853.2 |
| arsenate reductase (glutaredoxin) | EDI29_01460 | Not Available | Negative | 338660 - 339031 | 13791.7 |
| m48 family peptidase | EDI29_01465 | Not Available | Negative | 339046 - 340509 | 54001.4 |
| thioredoxin-dependent thiol peroxidase | EDI29_01470 | Not Available | Negative | 340679 - 341146 | 17454.6 |
| glycine cleavage system transcriptional repressor | EDI29_01475 | Not Available | Negative | 341200 - 341748 | 19830.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EDI29_01480 | Not Available | Positive | 342110 - 342988 | 31106.7 |
| outer membrane protein assembly factor bamc | EDI29_01485 | Not Available | Positive | 343005 - 344042 | 37370.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
