Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide mononucleotide deamidase-related protein yfay | EDI29_01385 | Not Available | Positive | 321795 - 322988 | 42950.9 |
| co-chaperone ybbn | EDI29_01390 | Not Available | Negative | 323414 - 324274 | 32211.6 |
| sdr family oxidoreductase | EDI29_01395 | Not Available | Negative | 324385 - 325155 | 27863.8 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | EDI29_01400 | Not Available | Negative | 325184 - 325867 | 25723.5 |
| abc transporter atp-binding protein | EDI29_01405 | Not Available | Positive | 325790 - 326521 | 26205.4 |
| abc transporter permease | EDI29_01410 | Not Available | Positive | 326518 - 328947 | 90063.4 |
| hypothetical protein | EDI29_01415 | Not Available | Positive | 328990 - 329238 | 9361.36 |
| spermidine n1-acetyltransferase | EDI29_01420 | Not Available | Negative | 329279 - 329854 | 22173.3 |
| hypothetical protein | EDI29_01430 | Not Available | Negative | 332146 - 333252 | 41340.1 |
| phosphoribosylglycinamide formyltransferase | EDI29_01435 | Not Available | Negative | 333518 - 334156 | 23448.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
