Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase rcsd | EDI29_01335 | Not Available | Negative | 307978 - 310665 | 101384.0 |
| mfs transporter | EDI29_01340 | Not Available | Negative | 310682 - 311851 | 40243.8 |
| isochorismate synthase menf | EDI29_01345 | Not Available | Positive | 312338 - 313660 | 49508.0 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | EDI29_01350 | Not Available | Positive | 313829 - 315511 | 60943.8 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | EDI29_01355 | Not Available | Positive | 315499 - 316314 | 29774.7 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | EDI29_01360 | Not Available | Positive | 316320 - 317177 | 31500.6 |
| o-succinylbenzoate synthase | EDI29_01365 | Not Available | Positive | 317177 - 318148 | 35818.9 |
| o-succinylbenzoate--coa ligase | EDI29_01370 | Not Available | Positive | 318136 - 319548 | 51666.7 |
| hypothetical protein | EDI29_01375 | Not Available | Positive | 319661 - 320200 | 18722.0 |
| tyrosine transporter tyrp | EDI29_01380 | Not Available | Negative | 320366 - 321574 | 42835.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
