Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDI29_01130 | Not Available | Positive | 258116 - 258403 | 10639.8 |
| hemolysin expression modulator hha | EDI29_01135 | Not Available | Negative | 258667 - 258870 | 8145.97 |
| hha toxicity modulator tomb | EDI29_01140 | Not Available | Negative | 258924 - 259292 | 14033.5 |
| 50s ribosomal protein l36 | EDI29_01145 | Not Available | Negative | 259889 - 260032 | 5384.8 |
| type b 50s ribosomal protein l31 | EDI29_01150 | Not Available | Negative | 260050 - 260298 | 9454.94 |
| efflux rnd transporter permease subunit | EDI29_01155 | Not Available | Negative | 260527 - 263655 | 112749.0 |
| efflux rnd transporter periplasmic adaptor subunit | EDI29_01160 | Not Available | Negative | 263684 - 264880 | 42143.2 |
| dna-binding transcriptional repressor acrr | EDI29_01165 | Not Available | Positive | 265046 - 265687 | 24686.8 |
| duf2496 domain-containing protein | EDI29_01170 | Not Available | Negative | 265745 - 265915 | 6137.42 |
| prephenate dehydrogenase | EDI29_01175 | Not Available | Negative | 265951 - 266487 | 20998.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
