Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDI29_01080 | Not Available | Negative | 248842 - 249285 | 15639.6 |
| lrp/asnc family transcriptional regulator | EDI29_01085 | Not Available | Positive | 249554 - 250015 | 17649.6 |
| smda family multidrug abc transporter permease/atp-binding protein | EDI29_01090 | Not Available | Positive | 250093 - 251862 | 65606.1 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | EDI29_01095 | Not Available | Positive | 251855 - 253630 | 65214.2 |
| p-ii family nitrogen regulator | EDI29_01100 | Not Available | Positive | 253990 - 254328 | 12275.9 |
| ammonium transporter amtb | EDI29_01105 | Not Available | Positive | 254362 - 255654 | 44748.4 |
| acyl-coa thioesterase ii | EDI29_01110 | Not Available | Negative | 255738 - 256601 | 32740.0 |
| hypothetical protein | EDI29_01115 | Not Available | Positive | 256814 - 257398 | 20317.6 |
| mgmt family protein | EDI29_01120 | Not Available | Negative | 257418 - 257738 | 12030.5 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 257913 - 258009 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
