Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | EDI29_01030 | Not Available | Positive | 236360 - 237664 | 48011.1 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | EDI29_01035 | Not Available | Positive | 238201 - 238824 | 23036.9 |
| atp-dependent protease atp-binding subunit clpx | EDI29_01040 | Not Available | Positive | 238987 - 240261 | 46561.0 |
| endopeptidase la | EDI29_01045 | Not Available | Positive | 240452 - 242833 | 88234.5 |
| dna-binding protein hu-beta | EDI29_01050 | Not Available | Positive | 243095 - 243367 | 9354.19 |
| peptidylprolyl isomerase | EDI29_01055 | Not Available | Positive | 243784 - 245664 | 68727.9 |
| competence protein comea | EDI29_01060 | Not Available | Positive | 245803 - 246168 | 12529.3 |
| ybgc/fadm family acyl-coa thioesterase | EDI29_01065 | Not Available | Positive | 246291 - 246689 | 15142.2 |
| 7-cyano-7-deazaguanine synthase quec | EDI29_01070 | Not Available | Negative | 246773 - 247468 | 25500.4 |
| plp-dependent cysteine synthase family protein | EDI29_01075 | Not Available | Negative | 247610 - 248686 | 39622.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
