Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yajq family cyclic di-gmp-binding protein | EDI29_00980 | Not Available | Positive | 225830 - 226321 | 18381.0 |
| mfs transporter | EDI29_00985 | Not Available | Negative | 226381 - 227745 | 48721.9 |
| protoheme ix farnesyltransferase | EDI29_00990 | Not Available | Negative | 228046 - 228936 | 32179.5 |
| cytochrome o ubiquinol oxidase subunit iv | EDI29_00995 | Not Available | Negative | 228951 - 229283 | 11906.9 |
| cytochrome o ubiquinol oxidase subunit iii | EDI29_01000 | Not Available | Negative | 229283 - 229897 | 22566.8 |
| cytochrome o ubiquinol oxidase subunit i | EDI29_01005 | Not Available | Negative | 229887 - 231878 | 74202.6 |
| cytochrome o ubiquinol oxidase subunit ii | EDI29_01010 | Not Available | Negative | 231883 - 232845 | 35552.3 |
| muropeptide mfs transporter ampg | EDI29_01015 | Not Available | Negative | 233267 - 234754 | 54468.9 |
| hypothetical protein | EDI29_01020 | Not Available | Negative | 234814 - 235392 | 20717.9 |
| transcriptional regulator bola | EDI29_01025 | Not Available | Positive | 235729 - 236043 | 11369.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
