Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | EDI29_00925 | Not Available | Positive | 217298 - 217774 | 16437.9 |
| n utilization substance protein b | EDI29_00930 | Not Available | Positive | 217799 - 218218 | 15734.0 |
| thiamine-phosphate kinase | EDI29_00935 | Not Available | Positive | 218287 - 219267 | 35659.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EDI29_00945 | Not Available | Negative | 219402 - 221267 | 67733.3 |
| (2e,6e)-farnesyl diphosphate synthase | EDI29_00950 | Not Available | Negative | 221285 - 222196 | 32451.6 |
| exodeoxyribonuclease vii small subunit | EDI29_00955 | Not Available | Negative | 222193 - 222441 | 9170.74 |
| hypothetical protein | EDI29_00960 | Not Available | Positive | 222493 - 222675 | 6815.44 |
| trna 4-thiouridine(8) synthase thii | EDI29_00965 | Not Available | Positive | 222695 - 224143 | 54756.9 |
| protein deglycase yajl | EDI29_00970 | Not Available | Negative | 224180 - 224770 | 21055.8 |
| 2-dehydropantoate 2-reductase | EDI29_00975 | Not Available | Negative | 224733 - 225641 | 33380.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
