Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin c | EDI29_00875 | Not Available | Negative | 207574 - 208176 | 22174.5 |
| duf479 domain-containing protein | EDI29_00880 | Not Available | Negative | 208388 - 208969 | 22814.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | EDI29_00885 | Not Available | Positive | 209101 - 210168 | 39224.8 |
| trna guanosine(34) transglycosylase tgt | EDI29_00890 | Not Available | Positive | 210266 - 211411 | 43415.0 |
| preprotein translocase subunit yajc | EDI29_00895 | Not Available | Positive | 211521 - 211853 | 11798.7 |
| protein translocase subunit secd | EDI29_00900 | Not Available | Positive | 211881 - 213728 | 66805.3 |
| protein translocase subunit secf | EDI29_00905 | Not Available | Positive | 213738 - 214712 | 35515.8 |
| duf3251 domain-containing protein | EDI29_00910 | Not Available | Negative | 214788 - 215357 | 20436.7 |
| transcriptional regulator nrdr | EDI29_00915 | Not Available | Positive | 215567 - 216016 | 17230.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EDI29_00920 | Not Available | Positive | 216051 - 217187 | 41338.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
