Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructokinase | EDI29_00825 | Not Available | Positive | 191924 - 192835 | 32398.6 |
| exonuclease subunit sbcc | EDI29_00830 | Not Available | Negative | 192839 - 196522 | 141321.0 |
| exonuclease subunit sbcd | EDI29_00835 | Not Available | Negative | 196519 - 197745 | 46072.9 |
| phosphate response regulator transcription factor phob | EDI29_00840 | Not Available | Positive | 198041 - 198730 | 26448.0 |
| phosphate regulon sensor histidine kinase phor | EDI29_00845 | Not Available | Positive | 198758 - 200080 | 50712.6 |
| phosphate abc transporter substrate-binding protein | EDI29_00850 | Not Available | Positive | 200096 - 201034 | 33546.2 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | EDI29_00855 | Not Available | Positive | 201276 - 202382 | 41598.1 |
| branched-chain amino acid transport system ii carrier protein | EDI29_00860 | Not Available | Positive | 202986 - 204305 | 46381.2 |
| proline-specific permease proy | EDI29_00865 | Not Available | Positive | 204446 - 205822 | 49964.5 |
| miniconductance mechanosensitive channel | EDI29_00870 | Not Available | Negative | 206097 - 207371 | 47367.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
