Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1987 domain-containing protein | EDI29_00725 | Not Available | Negative | 152337 - 152789 | 17222.1 |
| hypothetical protein | EDI29_00730 | Not Available | Negative | 152791 - 153345 | 20857.1 |
| cbs domain-containing protein | EDI29_00735 | Not Available | Negative | 153359 - 154603 | 46651.0 |
| alpha/beta fold hydrolase | EDI29_00740 | Not Available | Negative | 154811 - 156004 | 45045.6 |
| pectate lyase | EDI29_00745 | Not Available | Negative | 156255 - 157298 | 37161.6 |
| endopolygalacturonase | EDI29_00750 | Not Available | Positive | 157871 - 159079 | 42779.9 |
| hlyd family type i secretion periplasmic adaptor subunit | EDI29_00755 | Not Available | Negative | 159172 - 160341 | 43369.2 |
| type i secretion system permease/atpase | EDI29_00760 | Not Available | Negative | 160353 - 162491 | 78492.3 |
| type i secretion system outer membrane protein | EDI29_00765 | Not Available | Negative | 162531 - 163955 | 52263.7 |
| ig-like domain-containing protein | EDI29_00770 | Not Available | Negative | 164193 - 178796 | 492101.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
