Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe(3+)-dicitrate abc transporter substrate-binding protein fecb | EDI29_00675 | Not Available | Negative | 140960 - 141874 | 33470.1 |
| tonb-dependent siderophore receptor | EDI29_00680 | Not Available | Negative | 141946 - 144294 | 85816.8 |
| fec operon regulator fecr | EDI29_00685 | Not Available | Negative | 144385 - 145341 | 36163.7 |
| sigma-70 family rna polymerase sigma factor | EDI29_00690 | Not Available | Negative | 145338 - 145859 | 19452.5 |
| eal domain-containing protein | EDI29_00695 | Not Available | Positive | 146149 - 147771 | 61233.0 |
| alkylphosphonate utilization protein | EDI29_00700 | Not Available | Positive | 147892 - 148233 | 12267.7 |
| murein transglycosylase b | EDI29_00705 | Not Available | Positive | 148372 - 149457 | 39900.3 |
| sulfite exporter taue/safe family protein | EDI29_00710 | Not Available | Positive | 149956 - 150672 | 25062.9 |
| lysr family transcriptional regulator | EDI29_00715 | Not Available | Negative | 150669 - 151562 | 32784.7 |
| ggdef domain-containing protein | EDI29_00720 | Not Available | Negative | 151643 - 152350 | 26424.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
