Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope stress response activation lipoprotein nlpe | EDI29_00625 | Not Available | Positive | 130654 - 131343 | 25531.2 |
| dna mismatch repair protein muts | EDI29_00630 | Not Available | Negative | 131420 - 133942 | 93636.7 |
| hypothetical protein | EDI29_00635 | Not Available | Positive | 134536 - 134919 | 15052.8 |
| hypothetical protein | EDI29_00640 | Not Available | Positive | 134985 - 135380 | 15473.5 |
| duf4225 domain-containing protein | EDI29_00645 | Not Available | Negative | 135472 - 136362 | 33770.4 |
| hcp family type vi secretion system effector | EDI29_00650 | Not Available | Negative | 136310 - 136789 | 18162.6 |
| glutathione s-transferase | EDI29_00655 | Not Available | Negative | 137418 - 138047 | 23802.4 |
| iron-dicitrate abc transporter atp-binding subunit | EDI29_00660 | Not Available | Negative | 138241 - 139008 | 28066.3 |
| iron-dicitrate abc transporter permease fecd | EDI29_00665 | Not Available | Negative | 139009 - 139968 | 34305.6 |
| iron-dicitrate abc transporter permease fecc | EDI29_00670 | Not Available | Negative | 139968 - 140963 | 35170.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
