Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | EDI29_14965 | Not Available | Negative | 3300051 - 3300947 | 33485.0 |
| phosphodiesterase | EDI29_14970 | Not Available | Negative | 3301476 - 3302237 | 27604.6 |
| laci family dna-binding transcriptional regulator | EDI29_14975 | Not Available | Negative | 3302286 - 3303290 | 35272.4 |
| abc transporter permease subunit | EDI29_14980 | Not Available | Negative | 3303287 - 3304093 | 29409.9 |
| sugar abc transporter permease | EDI29_14985 | Not Available | Negative | 3304090 - 3304929 | 30116.1 |
| extracellular solute-binding protein | EDI29_14990 | Not Available | Negative | 3305000 - 3306133 | 41163.6 |
| abc transporter atp-binding protein | EDI29_14995 | Not Available | Negative | 3306156 - 3307322 | 42205.8 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | EDI29_15000 | Not Available | Negative | 3307540 - 3309975 | 88879.9 |
| cystathionine gamma-synthase | EDI29_15005 | Not Available | Negative | 3309978 - 3311138 | 41366.3 |
| met repressor | EDI29_15010 | Not Available | Positive | 3311325 - 3311642 | 12182.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
