Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family efflux transporter periplasmic adaptor subunit | EDI29_14900 | Not Available | Negative | 3286324 - 3287649 | 48949.5 |
| efflux rnd transporter periplasmic adaptor subunit | EDI29_14905 | Not Available | Negative | 3287646 - 3288449 | 28853.3 |
| hypothetical protein | EDI29_14920 | Not Available | Negative | 3290444 - 3290906 | 17688.0 |
| glutamate racemase | EDI29_14930 | Not Available | Negative | 3291761 - 3292618 | 31291.1 |
| tonb-dependent vitamin b12 receptor btub | EDI29_14935 | Not Available | Negative | 3292563 - 3294416 | 68229.7 |
| trna (uridine(54)-c5)-methyltransferase trma | EDI29_14940 | Not Available | Positive | 3294847 - 3295950 | 42197.6 |
| yijd family membrane protein | EDI29_14945 | Not Available | Negative | 3295991 - 3296377 | 13998.5 |
| hth-type transcriptional repressor fabr | EDI29_14950 | Not Available | Negative | 3296410 - 3297051 | 24199.1 |
| si-specific nad(p)(+) transhydrogenase | EDI29_14955 | Not Available | Positive | 3297252 - 3298658 | 51543.3 |
| dna-binding transcriptional regulator oxyr | EDI29_14960 | Not Available | Negative | 3298650 - 3299558 | 34208.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
