Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose mutarotase | EDI29_14595 | Not Available | Negative | 3208280 - 3208594 | 12271.5 |
| rhamnulose-1-phosphate aldolase | EDI29_14600 | Not Available | Negative | 3208725 - 3209549 | 30213.2 |
| l-rhamnose isomerase | EDI29_14605 | Not Available | Negative | 3209554 - 3210816 | 47223.0 |
| rhamnulokinase | EDI29_14610 | Not Available | Negative | 3210813 - 3212303 | 54831.4 |
| hth-type transcriptional activator rhas | EDI29_14615 | Not Available | Positive | 3212672 - 3213511 | 31878.6 |
| helix-turn-helix domain-containing protein | EDI29_14620 | Not Available | Positive | 3213536 - 3214390 | 32727.1 |
| txe/yoeb family addiction module toxin | EDI29_14625 | Not Available | Negative | 3214433 - 3214687 | 10267.4 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | EDI29_14630 | Not Available | Negative | 3214684 - 3214935 | 9368.2 |
| abc transporter atp-binding protein | EDI29_14635 | Not Available | Negative | 3215011 - 3216708 | 60943.5 |
| abc transporter permease | EDI29_14640 | Not Available | Negative | 3216705 - 3217571 | 30745.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
