Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | EDI29_00575 | Not Available | Positive | 120252 - 121040 | 28095.7 |
| lipid-a-disaccharide synthase | EDI29_00580 | Not Available | Positive | 121044 - 122195 | 42378.0 |
| ribonuclease hii | EDI29_00585 | Not Available | Positive | 122217 - 122813 | 21463.2 |
| dna polymerase iii subunit alpha | EDI29_00590 | Not Available | Positive | 122890 - 126372 | 129824.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | EDI29_00595 | Not Available | Positive | 126385 - 127344 | 35447.9 |
| voc family protein | EDI29_00600 | Not Available | Positive | 127452 - 127841 | 14657.5 |
| trna lysidine(34) synthetase tils | EDI29_00605 | Not Available | Positive | 127831 - 129237 | 52716.1 |
| rho-binding antiterminator | EDI29_00610 | Not Available | Negative | 129343 - 129603 | 9637.33 |
| yaep family protein | EDI29_00615 | Not Available | Negative | 129590 - 129790 | 7109.4 |
| yaeq family protein | EDI29_00620 | Not Available | Positive | 130031 - 130585 | 21121.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
