Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylhomocysteine hydrolase | EDI29_14440 | Not Available | Positive | 3172148 - 3172543 | 14337.4 |
| gnat family n-acetyltransferase | EDI29_14445 | Not Available | Positive | 3173036 - 3173464 | 16225.6 |
| cupin domain-containing protein | EDI29_14450 | Not Available | Positive | 3173555 - 3174676 | 42216.9 |
| alpha/beta hydrolase | EDI29_14455 | Not Available | Positive | 3174972 - 3176099 | 40839.8 |
| abc transporter permease | EDI29_14460 | Not Available | Negative | 3176166 - 3177341 | 43651.1 |
| abc transporter permease | EDI29_14465 | Not Available | Negative | 3177335 - 3178453 | 40683.9 |
| hlyd family efflux transporter periplasmic adaptor subunit | EDI29_14470 | Not Available | Negative | 3178453 - 3179451 | 37097.3 |
| tolc family protein | EDI29_14475 | Not Available | Negative | 3179448 - 3180869 | 52839.0 |
| aspartate ammonia-lyase | EDI29_14480 | Not Available | Negative | 3181202 - 3182641 | 52725.6 |
| lysr family transcriptional regulator | EDI29_14485 | Not Available | Negative | 3182893 - 3183888 | 37062.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
