Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | EDI29_14020 | Not Available | Positive | 3090961 - 3091710 | 27003.2 |
| duf1283 family protein | EDI29_14025 | Not Available | Positive | 3091976 - 3092326 | 13132.3 |
| hypothetical protein | EDI29_14030 | Not Available | Positive | 3092479 - 3093096 | 23142.9 |
| duf1161 domain-containing protein | EDI29_14035 | Not Available | Positive | 3093200 - 3093499 | 10262.1 |
| mfs transporter | EDI29_14040 | Not Available | Negative | 3093541 - 3095028 | 53555.1 |
| atp-dependent dethiobiotin synthetase biod | EDI29_14045 | Not Available | Negative | 3095131 - 3095796 | 23974.2 |
| rok family transcriptional regulator | EDI29_14050 | Not Available | Negative | 3095929 - 3097146 | 44280.7 |
| lysr family transcriptional regulator | EDI29_14055 | Not Available | Negative | 3097665 - 3098561 | 33099.5 |
| mfs transporter | EDI29_14060 | Not Available | Positive | 3098682 - 3099842 | 41275.8 |
| dna replication terminus site-binding protein | EDI29_14065 | Not Available | Positive | 3099994 - 3100929 | 35444.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
