Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | EDI29_13965 | Not Available | Negative | 3080606 - 3081382 | 28429.4 |
| duf2132 domain-containing protein | EDI29_13970 | Not Available | Positive | 3081565 - 3081852 | 10594.7 |
| glycoside hydrolase family 10 protein | EDI29_13975 | Not Available | Positive | 3081858 - 3083153 | 48343.4 |
| tetr/acrr family transcriptional regulator | EDI29_13980 | Not Available | Negative | 3083182 - 3083754 | 20693.9 |
| arginase family protein | EDI29_13985 | Not Available | Positive | 3083959 - 3084784 | 29819.1 |
| diaminobutyrate--2-oxoglutarate transaminase | EDI29_13990 | Not Available | Positive | 3085206 - 3086588 | 49620.1 |
| aspartate aminotransferase family protein | EDI29_13995 | Not Available | Positive | 3086598 - 3088109 | 55201.1 |
| tautomerase ppta | EDI29_14000 | Not Available | Negative | 3088178 - 3088408 | 8762.38 |
| mbl fold metallo-hydrolase | EDI29_14005 | Not Available | Positive | 3088635 - 3089411 | 28656.4 |
| helix-turn-helix domain-containing protein | EDI29_14010 | Not Available | Positive | 3089456 - 3090418 | 36154.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
