Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | EDI29_00525 | Not Available | Positive | 109305 - 110030 | 26033.8 |
| ribosome recycling factor | EDI29_00530 | Not Available | Positive | 110156 - 110713 | 20666.8 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | EDI29_00535 | Not Available | Positive | 111156 - 112352 | 42648.3 |
| (2e,6e)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase | EDI29_00540 | Not Available | Positive | 112552 - 113313 | 28517.0 |
| phosphatidate cytidylyltransferase | EDI29_00545 | Not Available | Positive | 113323 - 114180 | 31265.4 |
| sigma e protease regulator rsep | EDI29_00550 | Not Available | Positive | 114202 - 115557 | 49399.6 |
| outer membrane protein assembly factor bama | EDI29_00555 | Not Available | Positive | 115593 - 118025 | 89130.4 |
| molecular chaperone skp | EDI29_00560 | Not Available | Positive | 118166 - 118663 | 18337.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | EDI29_00565 | Not Available | Positive | 118667 - 119689 | 35815.3 |
| 3-hydroxyacyl-acp dehydratase fabz | EDI29_00570 | Not Available | Positive | 119792 - 120247 | 17106.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
