Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EDI29_13710 | Not Available | Positive | 3026591 - 3027304 | 25925.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EDI29_13715 | Not Available | Positive | 3027358 - 3027855 | 17550.2 |
| trna pseudouridine(13) synthase trud | EDI29_13720 | Not Available | Positive | 3027973 - 3029019 | 39173.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EDI29_13725 | Not Available | Positive | 3029160 - 3029786 | 23116.2 |
| murein hydrolase activator nlpd | EDI29_13730 | Not Available | Positive | 3030247 - 3031281 | 35700.7 |
| rna polymerase sigma factor rpos | EDI29_13735 | Not Available | Positive | 3031335 - 3032327 | 38075.1 |
| proline--trna ligase | EDI29_13740 | Not Available | Negative | 3032433 - 3034151 | 63845.6 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | EDI29_13745 | Not Available | Negative | 3034296 - 3035012 | 26748.1 |
| rcs stress response system protein rcsf | EDI29_13750 | Not Available | Negative | 3035009 - 3035419 | 14390.6 |
| metq/nlpa family lipoprotein | EDI29_13755 | Not Available | Negative | 3035715 - 3036530 | 29469.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
