Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | EDI29_13560 | Not Available | Positive | 2990149 - 2992332 | 79610.0 |
| abc transporter substrate-binding protein | EDI29_13565 | Not Available | Positive | 2992338 - 2993420 | 40612.9 |
| type 1 glutamine amidotransferase domain-containing protein | EDI29_13570 | Not Available | Negative | 2993498 - 2994175 | 24238.8 |
| coniferyl aldehyde dehydrogenase | EDI29_13575 | Not Available | Negative | 2994221 - 2995639 | 51470.5 |
| lysr family transcriptional regulator | EDI29_13580 | Not Available | Positive | 2995797 - 2996687 | 32632.7 |
| mfs transporter | EDI29_13585 | Not Available | Positive | 2996989 - 2998548 | 57744.3 |
| glycoside hydrolase family 105 protein | EDI29_13590 | Not Available | Positive | 2998592 - 2999731 | 44131.5 |
| sdr family oxidoreductase | EDI29_13595 | Not Available | Negative | 3000103 - 3000849 | 26319.6 |
| mbl fold metallo-hydrolase | EDI29_13600 | Not Available | Negative | 3000858 - 3001847 | 35897.9 |
| lysr family transcriptional regulator | EDI29_13605 | Not Available | Positive | 3001946 - 3002878 | 34645.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
