Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | EDI29_13505 | Not Available | Positive | 2972902 - 2974242 | 49080.8 |
| 2-dehydro-3-deoxyglucarate aldolase | EDI29_13510 | Not Available | Positive | 2974312 - 2975082 | 27686.1 |
| 2-hydroxy-3-oxopropionate reductase | EDI29_13515 | Not Available | Positive | 2975335 - 2976219 | 30436.3 |
| glycerate kinase | EDI29_13520 | Not Available | Positive | 2976396 - 2977541 | 39884.8 |
| two-component sensor histidine kinase bara | EDI29_13525 | Not Available | Negative | 2977989 - 2980784 | 104532.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EDI29_13530 | Not Available | Positive | 2980894 - 2982243 | 49772.0 |
| gtp diphosphokinase | EDI29_13535 | Not Available | Positive | 2982297 - 2984534 | 84177.6 |
| nucleoside triphosphate pyrophosphohydrolase | EDI29_13545 | Not Available | Positive | 2984927 - 2985739 | 30743.2 |
| ctp synthase (glutamine hydrolyzing) | EDI29_13550 | Not Available | Positive | 2985966 - 2987603 | 60185.6 |
| phosphopyruvate hydratase | EDI29_13555 | Not Available | Positive | 2987702 - 2988997 | 45259.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
