Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional | EDI29_13455 | Not Available | Positive | 2956682 - 2959537 | 107930.0 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | EDI29_13460 | Not Available | Positive | 2959652 - 2961088 | 50966.6 |
| nad-dependent dna ligase liga | EDI29_13465 | Not Available | Positive | 2961226 - 2963280 | 74718.9 |
| cytoplasmic protein | EDI29_13470 | Not Available | Positive | 2963285 - 2963506 | 8479.55 |
| hypothetical protein | EDI29_13475 | Not Available | Negative | 2963600 - 2963956 | 12691.5 |
| hypothetical protein | EDI29_13480 | Not Available | Negative | 2964154 - 2964570 | 14691.3 |
| pas domain s-box protein | EDI29_13485 | Not Available | Negative | 2964751 - 2966241 | 53812.6 |
| galactarate dehydratase | EDI29_13490 | Not Available | Negative | 2967424 - 2968998 | 56245.3 |
| mfs transporter | EDI29_13495 | Not Available | Positive | 2969554 - 2970906 | 49113.8 |
| glucarate dehydratase | EDI29_13500 | Not Available | Positive | 2971512 - 2972864 | 49589.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
