Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqcc family protein | EDI29_00475 | Not Available | Positive | 100286 - 100636 | 13387.7 |
| trna pseudouridine(65) synthase truc | EDI29_00480 | Not Available | Positive | 100629 - 101414 | 29913.8 |
| iap repeat-containing protein 6 | EDI29_00485 | Not Available | Negative | 101382 - 101762 | 14633.3 |
| flavodoxin | EDI29_00490 | Not Available | Positive | 101613 - 102065 | 16271.2 |
| duf3461 family protein | EDI29_00495 | Not Available | Negative | 102173 - 102562 | 15226.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EDI29_00500 | Not Available | Negative | 102617 - 103444 | 30016.9 |
| bifunctional uridylyltransferase/uridylyl-removing protein glnd | EDI29_00505 | Not Available | Negative | 103473 - 106187 | 104379.0 |
| type i methionyl aminopeptidase | EDI29_00510 | Not Available | Negative | 106301 - 107095 | 29224.4 |
| 30s ribosomal protein s2 | EDI29_00515 | Not Available | Positive | 107440 - 108165 | 26698.1 |
| elongation factor ts | EDI29_00520 | Not Available | Positive | 108300 - 109151 | 30478.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
