Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | EDI29_13255 | Not Available | Negative | 2911842 - 2912555 | 26112.2 |
| type iv pilus twitching motility protein pilt | EDI29_13260 | Not Available | Positive | 2912577 - 2913593 | 36940.5 |
| sensor domain-containing diguanylate cyclase | EDI29_13265 | Not Available | Negative | 2913562 - 2915394 | 69857.6 |
| hamp domain-containing protein | EDI29_13270 | Not Available | Negative | 2915907 - 2917478 | 57637.0 |
| hth-type transcriptional repressor nsrr | EDI29_13275 | Not Available | Positive | 2917773 - 2918198 | 15813.5 |
| ribonuclease r | EDI29_13280 | Not Available | Positive | 2918241 - 2920697 | 92974.4 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | EDI29_13285 | Not Available | Positive | 2920799 - 2921530 | 26533.2 |
| hamp domain-containing protein | EDI29_13290 | Not Available | Negative | 2921587 - 2923122 | 55315.8 |
| duf350 domain-containing protein | EDI29_13295 | Not Available | Positive | 2923490 - 2923888 | 14206.5 |
| peptide chain release factor h | EDI29_13300 | Not Available | Negative | 2923994 - 2924617 | 22987.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
