Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EDI29_13145 | Not Available | Negative | 2895743 - 2897614 | 68625.9 |
| l-ala-d/l-glu epimerase | EDI29_13150 | Not Available | Negative | 2897659 - 2898627 | 35174.8 |
| ribonuclease ph | EDI29_13160 | Not Available | Positive | 2899068 - 2899784 | 25457.6 |
| orotate phosphoribosyltransferase | EDI29_13165 | Not Available | Positive | 2899841 - 2900482 | 23423.2 |
| nucleoid occlusion factor slma | EDI29_13170 | Not Available | Negative | 2900547 - 2901143 | 23141.0 |
| dutp diphosphatase | EDI29_13175 | Not Available | Negative | 2901269 - 2901727 | 16180.6 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | EDI29_13180 | Not Available | Negative | 2901705 - 2902949 | 44135.2 |
| jab domain-containing protein | EDI29_13185 | Not Available | Positive | 2903135 - 2903800 | 24757.2 |
| 50s ribosomal protein l28 | EDI29_13190 | Not Available | Positive | 2904038 - 2904274 | 8946.97 |
| 50s ribosomal protein l33 | EDI29_13195 | Not Available | Positive | 2904286 - 2904453 | 6357.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
