Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium polonicum |
| Strain | DPMP315 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183953 bp
Thymine Count
1172583 bp
Guanine Count
1223939 bp
Cytosine Count
1256503 bp
Genome Length
4842350 bp
Protein-coding Genes
4241 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | EDI29_12945 | Not Available | Positive | 2851069 - 2852061 | 36800.2 |
| xylulokinase | EDI29_12950 | Not Available | Negative | 2852076 - 2853533 | 52753.2 |
| xylose isomerase | EDI29_12955 | Not Available | Negative | 2853600 - 2854919 | 49369.2 |
| d-xylose abc transporter substrate-binding protein | EDI29_12960 | Not Available | Positive | 2855278 - 2856273 | 35508.7 |
| xylose abc transporter atp-binding protein | EDI29_12965 | Not Available | Positive | 2856394 - 2857935 | 56711.1 |
| sugar abc transporter permease | EDI29_12970 | Not Available | Positive | 2857913 - 2859094 | 41506.0 |
| xylose operon transcription regulator xylr | EDI29_12975 | Not Available | Positive | 2859231 - 2860409 | 44760.6 |
| dj-1/pfpi family protein | EDI29_12980 | Not Available | Negative | 2860491 - 2861066 | 21248.6 |
| argininosuccinate synthase | EDI29_12985 | Not Available | Positive | 2861479 - 2862825 | 50015.2 |
| acyl-homoserine-lactone synthase | EDI29_12990 | Not Available | Positive | 2863094 - 2863744 | 25213.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
